A radio Search for high redshift HI absorption

Ground based optical observations have yielded considerable information on the statistics of damped-lyman alpha systems. In particular these systems are known to be the dominant repository of the observed neutral gas at high redshift. However, particularly at high redshift, there is the possibility that optical observations could be biased due to the exclusion of damped-lyman alpha systems that contain moderate to significant amounts of dust. Independent observational constraints on the neutral hydrogen content at high redshifts and the amount of dust in high redshift systems can be obtained from a radio search against the bright lobes of distant radio galaxies (which is less affected by the presence of dust in foreground damped-lyman alpha systems). We describe here a pilot radio survey along the line of sight to a small sample of high redshift radio galaxies, and also present some preliminary results. The survey uses a novel observing mode at the WSRT which enables one to make sensitive searches of a large redshift interval in a modest amount of telescope time.Comment: A version with figures is available at http://www.nfra.nl/~chengalu/ To appear in "Cold Gas at High Redshift", Eds. M.Bremer et al. (Kluwer, Dordrecht

Using drones and sirens to elicit avoidance behaviour in white rhinoceros as an anti-poaching tactic.

Poaching fuelled by international trade in horn caused the deaths of over 1000 African rhinoceros (Ceratotherium simum and Diceros bicornis) per year between 2013 and 2017. Deterrents, which act to establish avoidance behaviours in animals, have the potential to aid anti-poaching efforts by moving at-risk rhinos away from areas of danger (e.g. near perimeter fences). To evaluate the efficacy of deterrents, we exposed a population of southern white rhinos (C. simum simum) to acoustic- (honeybee, siren, turtle dove), olfactory- (chilli, sunflower), and drone-based stimuli on a game reserve in South Africa. We exposed rhinos to each stimulus up to four times. Stimuli were considered effective deterrents if they repeatedly elicited avoidance behaviour (locomotion away from the deterrent). Rhinos travelled significantly further in response to the siren than to the honeybee or turtle dove stimulus, and to low-altitude drone flights than to higher altitude flights. We found the drone to be superior at manipulating rhino movement than the siren owing to its longer transmission range and capability of pursuit. By contrast, the scent stimuli were ineffective at inciting avoidance behaviour. Our findings indicate that deterrents are a prospective low-cost and in situ method to manage rhino movement in game reserves

An efficient semiparametric maxima estimator of the extremal index

The extremal index $\theta$, a measure of the degree of local dependence in the extremes of a stationary process, plays an important role in extreme value analyses. We estimate $\theta$ semiparametrically, using the relationship between the distribution of block maxima and the marginal distribution of a process to define a semiparametric model. We show that these semiparametric estimators are simpler and substantially more efficient than their parametric counterparts. We seek to improve efficiency further using maxima over sliding blocks. A simulation study shows that the semiparametric estimators are competitive with the leading estimators. An application to sea-surge heights combines inferences about $\theta$ with a standard extreme value analysis of block maxima to estimate marginal quantiles.Comment: 17 pages, 7 figures. Minor edits made to version 1 prior to journal publication. The final publication is available at Springer via http://dx.doi.org/10.1007/s10687-015-0221-

A large radio nebula around P Cygni

We present a large set of radio observations of the luminous blue variable P Cygni. These include two 6-cm images obtained with MERLIN which spatially resolve the 6-cm photosphere, monitoring observations obtained at Jodrell Bank every few days over a period of two months, and VLA observations obtained every month for seven years. This combination of data shows that the circumstellar environment of P Cyg is highly inhomogeneous, that there is a radio nebula extending to almost an arcminute from the star at 2 and 6 cm, and that the radio emission is variable on a time-scale no longer than one month, and probably as short as a few days. This short-time-scale variability is difficult to explain. We present a model for the radio emission with which we demonstrate that the star has probably been losing mass at a significant rate for at least a few thousand years, and that it has undergone at least two major outbursts of increased mass loss during the past two millenia

Probing Density Fluctuations using the FIRST Radio Survey

We use results of angular clustering measurements in 3000 sq. deg's of the FIRST radio survey to infer information on spatial clustering. Measurements are compared with CDM-model predictions. Clustering of FIRST sources with optical ID's in the APM catalog are also investigated. Finally, we outline a preliminary search for a weak lensing signal in the survey.Comment: 6 pages latex, 2 figures, to appear in Cosmology with the New Radio Surveys (Kluwer

Radio-optical orientation of E/S0 galaxies: APM versus FIRST

We searched for extended radio sources in isolated E/S0 galaxies comparing the FIRST and APM catalogues for a single POSS plate. The 35 most promising candidates were visually inspected on the Digitized Sky Survey (DSS) and on FIRST images: we find several spirals and interacting galaxies and a few E/S0s with very weak, marginally extended radio cores. The only double-lobed (previously known) radio source is a dumbbell. For the rest of the objects, all hosting small and weak radio sources, the DSS is inadequate to determine morphological types. Thus a significant increase in sample size will be a major effort.Comment: 2 pages; no figures; to appear in Proc. "Observational Cosmology with the New Radio Surveys", eds. M. Bremer, N. Jackson & I. Perez-Fournon, Kluwer Acad. Pres

Motivated proteins: a web application for studying small three-dimensional protein motifs

<b>BACKGROUND:</b> Small loop-shaped motifs are common constituents of the three-dimensional structure of proteins. Typically they comprise between three and seven amino acid residues, and are defined by a combination of dihedral angles and hydrogen bonding partners. The most abundant of these are alphabeta-motifs, asx-motifs, asx-turns, beta-bulges, beta-bulge loops, beta-turns, nests, niches, Schellmann loops, ST-motifs, ST-staples and ST-turns.We have constructed a database of such motifs from a range of high-quality protein structures and built a web application as a visual interface to this. <b>DESCRIPTION:</b> The web application, Motivated Proteins, provides access to these 12 motifs (with 48 sub-categories) in a database of over 400 representative proteins. Queries can be made for specific categories or sub-categories of motif, motifs in the vicinity of ligands, motifs which include part of an enzyme active site, overlapping motifs, or motifs which include a particular amino acid sequence. Individual proteins can be specified, or, where appropriate, motifs for all proteins listed. The results of queries are presented in textual form as an (X)HTML table, and may be saved as parsable plain text or XML. Motifs can be viewed and manipulated either individually or in the context of the protein in the Jmol applet structural viewer. Cartoons of the motifs imposed on a linear representation of protein secondary structure are also provided. Summary information for the motifs is available, as are histograms of amino acid distribution, and graphs of dihedral angles at individual positions in the motifs. <b>CONCLUSION:</b> Motivated Proteins is a publicly and freely accessible web application that enables protein scientists to study small three-dimensional motifs without requiring knowledge of either Structured Query Language or the underlying database schem

Searching (the) FIRST radio arcs near ACO clusters

Gravitational lensing (GL) of distant radio sources by galaxy clusters should produce radio arc(let)s. We extracted radio sources from the FIRST survey near Abell cluster cores and found their radio position angles to be uniformly distributed with respect to the cluster centres. This result holds even when we restrict the sample to the richest or most centrally condensed clusters, and to sources with high S/N and large axial ratio. Our failure to detect GL with statistical methods may be due to poor cluster centre positions. We did not find convincing candidates for arcs either. Our result agrees with theoretical estimates predicting that surveys much deeper than FIRST are required to detect the effect. This is in apparent conflict with the detection of such an effect claimed by Bagchi & Kapahi (1995).Comment: 6 pages; 8 figures and 1 style file are included; to appear in Proc. "Observational Cosmology with the New Radio Surveys", eds. M. Bremer, N. Jackson & I. Perez-Fournon, Kluwer Acad. Pres

A Size of ~10 Mpc for the Ionized Bubbles at the End of Cosmic Reionization

The first galaxies to appear in the universe at redshifts z>20 created ionized bubbles in the intergalactic medium of neutral hydrogen left over from the Big-Bang. It is thought that the ionized bubbles grew with time, surrounded clusters of dwarf galaxies and eventually overlapped quickly throughout the universe over a narrow redshift interval near z~6. This event signaled the end of the reionization epoch when the universe was a billion years old. Measuring the hitherto unknown size distribution of the bubbles at their final overlap phase is a focus of forthcoming observational programs aimed at highly redshifted 21cm emission from atomic hydrogen. Here we show that the combined constraints of cosmic variance and causality imply an observed bubble size at the end of the overlap epoch of ~10 physical Mpc, and a scatter in the observed redshift of overlap along different lines-of-sight of ~0.15. This scatter is consistent with observational constraints from recent spectroscopic data on the farthest known quasars. Our novel result implies that future radio experiments should be tuned to a characteristic angular scale of ~0.5 degrees and have a minimum frequency band-width of ~8 MHz for an optimal detection of 21cm flux fluctuations near the end of reionization.Comment: Accepted for publication in Nature. Press embargo until publishe

Non-BBN Constraints On The Key Cosmological Parameters

Since the baryon-to-photon ratio "eta" is in some doubt at present, we ignore the constraints on eta from big bang nucleosynthesis (BBN) and fit the three key cosmological parameters (h, Omega_M, eta) to four other observational constraints: Hubble parameter, age of the universe, cluster gas (baryon) fraction, and effective shape parameter "Gamma". We consider open and flat CDM models and flat "Lambda"-CDM models, testing goodness of fit and drawing confidence regions by the Delta-chi^2 method. CDM models with Omega_M = 1 (SCDM models) are accepted only because we allow a large error on h, permitting h < 0.5. Open CDM models are accepted only for Omega_M \gsim 0.4. Lambda-CDM models give similar results. In all of these models, large eta (\gsim 6) is favored strongly over small eta, supporting reports of low deuterium abundances on some QSO lines of sight, and suggesting that observational determinations of primordial 4He may be contaminated by systematic errors. Only if we drop the crucial Gamma constraint are much lower values of Omega_M and eta permitted.Comment: 12 pages, Kluwer Latex, 2 Postscript figures, to appear in the proceedings of the ISSI Workshop, "The Primordial Nuclei and Their Galactic Evolution" (Bern, May 6-10, 1997), ed. N. Prantzos, M. Tosi, and R. von Steiger (Kluwer, Dordrecht